HK Covid lockdown

Hong Kong has a Covid-19 lockdown in place (Jan 8th - Jan 21st, 2022) for flights from Australia, Canada, France, India, Pakistan, the Philippines, UK and the USA.…

I wonder if Hong Kong knows that the Covid virus does not carry a passport. What if a traveler from one of the banned countries happened to make a transit stop e.g. in Tokyo or Singapore. Could that traveler continue onto Hong Kong?

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I’m pretty sure that the idea is to stop most of the virus carriers.
We already know you can’t stop them all.